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Category: Scientific

Maths

Pyomo – object-oriented algebraic modeling language

June 15, 2026 Steve Emms Scientific

Pyomo is an object-oriented algebraic modeling language designed for formulating, analyzing, and solving structured optimization problems.

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Maths

JAX – Python library for high-performance numerical computing

June 15, 2026 Steve Emms Scientific

JAX is a Python library for high-performance numerical computing and large-scale machine learning.

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Data Science

NEST – simulator for spiking neural network models

June 15, 2026 Steve Emms Scientific

NEST is a simulator for spiking neural network models. It focuses on the dynamics, size, and structure of neural systems.

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DNA

Open Hospital – Health Information Management System

June 14, 2026 Steve Emms Scientific

Open Hospital is a Health Information Management System designed to help hospitals, health centres, and care facilities.

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Data Science

NEURON – build and run biophysically detailed models

June 14, 2026 Steve Emms Scientific

NEURON is a simulation environment for building and running biophysically detailed models of individual neurons and networks of neurons.

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Natural Language Processing

8 Excellent C++ Natural Language Processing Tools

June 14, 2026 Steve Emms Programming, Roundup, Scientific

Natural language processing (NLP) is an exciting field of computer science, artificial intelligence, and computational linguistics.

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Machine Learning in Linux

AI00 RWKV Server – inference API server for running RWKV language models

June 14, 2026 Steve Emms Scientific

AI00 RWKV Server is an open source RWKV inference API server with Vulkan acceleration and OpenAI API compatibility.

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Bioinformatics

VCell – modeling and simulation framework

June 14, 2026 Steve Emms CLI, Scientific

VCell is a modeling and simulation framework for computational cell biology.

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DNA

Ottehr – modern, modular electronic health record platform

June 14, 2026 Steve Emms Scientific

Ottehr is a modern, modular EHR platform for building and white-labeling production healthcare apps.

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Data Science

Elementary – dbt-native data observability command-line tool

June 14, 2026 Steve Emms CLI, Scientific

Elementary is a dbt-native data observability command-line tool for analytics and data engineering teams.

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Bioinformatics

COPASI – biochemical systems simulator

June 14, 2026 Steve Emms CLI, GUI, Scientific

COPASI is a biochemical systems simulator for building, simulating, and analyzing models of biochemical networks and their dynamics.

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Data Science

OpenMetadata – unified metadata platform

June 13, 2026 Steve Emms Scientific

OpenMetadata is a unified metadata platform designed for data discovery, data observability, data governance, and metadata management.

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DNA

Bahmni – hospital management and electronic medical record system

June 13, 2026 Steve Emms Scientific

Bahmni is a hospital management and electronic medical record system.

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Data Science

Soda Core – data quality and data contract verification engine

June 13, 2026 Steve Emms CLI, Scientific

Soda Core is a data quality and data contract verification engine for modern data stacks.

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Data Science

napari – Python-based image viewer

June 13, 2026 Steve Emms GUI, Scientific

napari is a Python-based image viewer aimed at researchers, scientists, and developers working with complex imaging datasets.

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dna-medical

5 Best Free and Open Source Linux Medical Practice Management Software

June 13, 2026 Steve Emms Roundup, Scientific

Medical Practice Management Software is a type of software that is designed to supervise and support the day-to-day operations of a medical practice.

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DNA

CellProfiler – image analysis application for researchers

June 13, 2026 Steve Emms Scientific

CellProfiler is an image analysis application for researchers working with microscopy data.

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Chemistry

asciiMol – terminal-based molecule viewer

June 12, 2026 Steve Emms Scientific, TUI

asciiMol is a terminal-based molecule viewer written in Python.

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Reference Management

8 Best Free and Open Source Linux Reference Management Tools

June 12, 2026 Steve Emms Education, Roundup, Scientific

Reference management software is software for academics and authors to use to record and use bibliographic citations.

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Network

12 Best Free and Open Source File Systems for Big Data

June 11, 2026 Steve Emms Big Data, Internet, Roundup, Scientific

This feature highlights the finest open source file systems designed to cope with the demands imposed by Big Data.

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