A Genome browser provides a graphical interface for users to browse, search, retrieve and analyze genomic sequence and annotation data.
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Category: Scientific
Taline – eye-care break reminder
Taline is an eye-care application with configurable break reminders, countdowns, notifications and support for the 20-20-20 rule.
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6 Best Free and Open Source Chemical Engineering, Kinetics & Thermodynamics Tools
Explore free and open source chemical engineering software for Linux, including thermodynamics, chemical kinetics and process simulation.
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17 Best Free and Open Source Linux GPS Tools
The Global Positioning System (GPS) is a satellite-based navigation satellite system consisting of a network of satellites.
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Blink – configurable break reminder
Blink is a configurable break reminder with multiple timers, desktop notifications, optional sounds, commands and input activity tracking.
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Gosling.js – declarative genomic data visualisation
Gosling.js builds interactive genomic visualisations from declarative specifications, with scalable tracks and linked exploration views.
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D-GENIES – interactive dot plots for genome comparisons
D-GENIES compares large genome assemblies with interactive dot plots, revealing sequence rearrangements, inversions and repeated regions.
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IGV-Web App – explore genomic data in a web browser
IGV-Web App lets researchers inspect reference genomes, alignments and variant tracks in a browser using local or remote genomic files.
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Kookbook – recipe manager using structured Markdown files
Kookbook manages Markdown recipe collections on Linux, with searchable titles, ingredient indexes, recipe templates and printing support.
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Machine Learning in Linux: Local AI Studio – local AI toolkit
Local AI Studio combines local LLM chat, Stable Diffusion, Whisper transcription and Kokoro text-to-speech in one Linux interface.
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Foodsoft – web-based software to manage food cooperatives
Foodsoft is open source web-based software for managing food cooperatives, including orders, products, members and accounting.
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CGView.js – interactive circular and linear genome maps
CGView.js is a library for creating interactive circular and linear genome maps with features, plots and sequence-level navigation.
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SynFlow – visualize genome alignments and structural variation
SynFlow explores genome alignments, synteny and structural rearrangements with interactive multi-genome visualizations.
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Chromoscope – multiscale structural variation genome browser
Chromoscope is an interactive web genome browser for exploring structural variation and copy-number patterns across human cancer genomes.
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19 Best Free and Open Source Linux Mapping Tools
This roundup includes mapping software which offers quick access to maps all across the world. We also include some specialised tools.
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13 Best Free and Open Source Linux Robotics Software
Robotics is the branch of artificial intelligence concerned with the study of robots. We recommend the best robotics software for Linux.
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Quantum ESPRESSO – electronic-structure and materials modelling suite
Quantum ESPRESSO is a suite for electronic-structure calculations and materials modelling using density-functional theory, plane waves and pseudopotentials.
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OpenMD – molecular dynamics simulation engine
OpenMD is a molecular dynamics engine for simulating liquids, proteins, nanoparticles, interfaces and systems with orientational degrees of freedom.
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4 Best Free and Open Source Cheminformatics Tools
Explore the best free and open source cheminformatics tools for analysing chemical structures, compounds, reactions and molecular data.
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OpenMolcas – multiconfigurational quantum chemistry package
OpenMolcas is a quantum chemistry package centred on multiconfigurational electronic-structure methods including CASSCF and CASPT2.
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