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Tag: chemistry

Chemistry

PySCF – Python framework for quantum chemistry

May 5, 2026 Steve Emms Scientific

PySCF combines Python scripting with quantum chemistry methods for molecules and solids, including DFT, coupled cluster and multireference.

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Chemistry

RDKit – cheminformatics and machine-learning software

May 4, 2026 Steve Emms Scientific

RDKit is a cheminformatics toolkit for molecular manipulation, descriptors, fingerprints, searching, database work and machine learning.

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Chemistry

Periotable – modern periodic table app

April 22, 2026 Steve Emms GUI, Scientific

Periotable is a modern periodic table application that presents chemical element information in a polished interface.

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Chemistry

Cantera – chemical kinetics, thermodynamics and transport toolkit

August 24, 2025 Steve Emms Scientific

Cantera models chemical kinetics, thermodynamics and transport, with reactor networks, flame simulations and sensitivity analysis tools.

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Chemistry

Nucleus – browse the chemical elements

August 14, 2025 Steve Emms GUI, Scientific

Nuclues gives you the ability to view the periodic table of the elements, as well as a variety of properties for each element,

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Data Science

OpenChrom – software for chromatography, spectrometry and spectroscopy

May 17, 2025 Steve Emms GUI, Scientific

OpenChrom is software for chromatography, spectrometry and spectroscopy. Data from different systems can be imported and analyzed.

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Chemistry

JChemPaint is a chemical 2D structure editor

April 4, 2025 Steve Emms GUI, Scientific

JChemPaint (or JCP for short) is the editor and viewer for 2D chemical structures developed using the Chemistry Development Kit (CDK).

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Chemistry

ChemCanvas – 2D chemical drawing tool

March 17, 2025 Steve Emms GUI, Scientific

ChemCanvas is a chemical drawing tool. You can draw organic chemical structures and reactions very easily and quickly.

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Chemistry

multiElement – alternative versions of the periodic table of chemical elements

March 3, 2025 Steve Emms GUI, Scientific

multiElement offers complete encyclopedic information about each chemical element.

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Chemistry

P-Table – terminal TUI scientific program

February 28, 2025 Steve Emms Scientific, TUI

P-Table is a beautiful TUI periodic table for Linux terminals coded in C with no extra dependencies.

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Chemistry

periodic-table-cli is an interactive periodic table of elements app for the console

June 4, 2024 Steve Emms CLI, Scientific, TUI

The periodic table, in chemistry, is the organized array of all the chemical elements in order of increasing atomic number.

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Chemistry

Orac – OpenMP/MPI molecular dynamics engine

October 15, 2023 Steve Emms Scientific

Orac simulates solvated biomolecules using molecular dynamics, with replica exchange, metadynamics and parallel enhanced sampling.

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Chemistry

OpenMM – high-performance toolkit for molecular simulation

October 15, 2023 Steve Emms Scientific

OpenMM provides programmable molecular simulations with GPU acceleration, custom force expressions, integrators and Python-based workflows.

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Chemistry

MDynaMix – general purpose molecular dynamics

October 15, 2023 Steve Emms Scientific

MDynaMix performs molecular dynamics simulations of rigid and flexible molecules, with ensemble controls and solvation free-energy methods.

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Chemistry

LAMMPS – classical molecular dynamics simulator

October 15, 2023 Steve Emms Scientific

LAMMPS simulates atomistic and mesoscale materials with many force fields, parallel processing, GPU acceleration and extensible workflows.

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Chemistry

tomviz – processing, visualization, and analysis of 3D tomographic data

October 15, 2023 Steve Emms Scientific

The Tomviz project is a cross platform, open source application for the processing, visualization, and analysis of 3D tomographic data.

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Chemistry

GROMACS – versatile package for molecular dynamics

October 15, 2023 Steve Emms Scientific

GROMACS simulates molecular dynamics for proteins, lipids and other materials, with GPU acceleration, trajectory analysis and MPI support.

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Chemistry

Psi4 – high-accuracy quantum chemistry software

October 15, 2023 Steve Emms CLI, Scientific

Psi4 performs molecular quantum chemistry calculations with DFT, coupled-cluster methods, geometry optimisation and Python scripting.

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Chemistry

GAMESS – ab initio molecular electronic structure software

October 15, 2023 Steve Emms Scientific

The General Atomic and Molecular Electronic Structure System (GAMESS) is a free and open source general ab initio quantum chemistry package.

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Chemistry

MPQC – massively parallel quantum chemistry program

October 15, 2023 Steve Emms CLI, Scientific

MPQC carries out massively parallel electronic-structure calculations for molecules and periodic systems using distributed tensor methods.

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