oxDNA is an extensible simulation+analysis framework. The nucleic-acid-related force fields are implemented: oxDNA1, oxDNA2, oxRNA, oxNA.
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Category: Scientific
Crush – terminal-based AI assistant
Crush is a powerful terminal-based AI assistant that helps with software development tasks.
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binjr – time series browser
binjr is a time series browser; it renders time series data produced by other applications as dynamically editable representations
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text – R-package for analyzing natural language with transformers-based large language models
text is an R package for analyzing natural language with transformers-based large language models.
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Charta – generate colorful terminal graphs
Charta is a utility written in Go to display small colored charts in the terminal.
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ASTAP – Astrometric STAcking Program
ASTAP is a free stacking and astrometric solver (plate solver) program for deep sky images.
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marimo – reactive Python notebook
marimo is a reactive Python notebook: run a cell or interact with a UI element, and marimo automatically runs dependent cells
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Cherry Studio – desktop client that supports multiple LLM providers
Cherry Studio is a desktop client that supports multiple LLM providers, available on Linux, macOS, and Windows.
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8 Best Free and Open Source GUI Electronic Circuit Simulators
Electronic circuit simulation uses mathematical models to replicate the behavior of an actual electronic device or circuit. We feature the best GUI tools.
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Luna – simple menstrual cycle and pregnancy tracker
Luna helps you log your periods, predict ovulation, view helpful cycle statistics, and more.
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corpustools – various tools for analyzing text corpora
The corpustools package offers various tools for anayzing text corpora.
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RTextTools – automatic text classification via supervised learning
RTextTools is a machine learning package for automatic text classification that makes it simple to get started with machine learning.
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SimulIDE – simple real time electronic circuit simulator
SimulIDE is a simple real time electronic circuit simulator, intended for hobbyist or students to learn and experiment
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textTinyR – text processing for small or big data
The textTinyR package consists of text processing functions for small or big data files.
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sentimentr – dictionary based sentiment analysis
sentimentr calculates text polarity sentiment in the English language at the sentence level.
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topicmodels – interface to LDA and CTM models
topicmodels provides an interface to the C code for Latent Dirichlet Allocation (LDA) models and Correlated Topics Models (CTM)
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tokenizers – R package
tokenizers is an R package offers functions with a consistent interface to convert natural language text into tokens.
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textclean – collection of tools to clean and normalize text
textclean is a collection of tools to clean and normalize text. Many of these tools have been taken from the qdap package
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Reins: Chat for Ollama – private AI chat
Reins is a chat client for a self-hosted Ollama AI models. Connect remotely, customize prompts, adjust parameters, and more.
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eyerest – remind your eyes to take a screen break
eyerest is a Bash script to remind your eyes to have a little break from the screen. Set time interval and notifications via text files.
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