NAMD is a parallel, object-oriented molecular dynamics code designed for high-performance simulation of large biomolecular systems.
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Tag: C++
VMD – molecular visualization program
VMD is a molecular visualization program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scripting.
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simuPOP – general-purpose individual-based forward-time population genetics simulation environment
simuPOP is a general-purpose individual-based forward-time population genetics simulation environment.
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MUSCLE – multiple alignment software
MUSCLE is a program for creating multiple alignments of amino acid or nucleotide sequences.
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SeaView – graphical user interface for molecular phyologeny
SeaView is a multi-platform, graphical user interface for multiple sequence alignment and molecular phylogeny.
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TreeView X – phylogeny tree viewer
TreeView X is an open source and multi-platform program to display phylogenetic trees. It can read and display NEXUS and Newick format tree files.
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Kobo Deluxe – enhanced version of Akira Higuchi’s game XKobo
Kobo Deluxe is a third person scrolling 2D shooter with a simple and responsive control system. Kobo Deluxe has an improved graphics engine.
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Chromium B.S.U. – arcade-style, top-scrolling space shooter
Chromium is a top down fast paced high action scrolling space shooter. It is a similar game to a classic DOS game called Raptor.
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MotoGT – old-school motorcycle racing game
MotoGT is a multiplatform 2D top-viewed motorcycle racing game. In career mode you start with a regular bike, but when you win races you get experience.
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SuperTuxKart – free 3D open-source arcade racer game
SuperTuxKart is an enhanced version of TuxKart, the kart racing game originally done by Steve Baker, featuring Tux and a bunch of his friends.
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