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Category: Scientific

Physics

DualSPHysics – Smoothed Particle Hydrodynamics solver

June 18, 2026 Steve Emms Scientific

DualSPHysics is a Smoothed Particle Hydrodynamics solver designed for modelling free-surface flow phenomena.

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Physics

ESPResSo – molecular dynamics package

June 17, 2026 Steve Emms Scientific

ESPResSo is a molecular dynamics package designed for simulating and analyzing coarse-grained many-particle systems used in soft-matter research.

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Maths

12 Essential Free and Open Source Python Maths Tools

June 17, 2026 Eilidih Parris Programming, Roundup, Scientific

Great libraries and tools that are ideal for mathematicians working with Python.

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Physics

Meep – electromagnetic simulation

June 17, 2026 Steve Emms Scientific

Meep is a software package for electromagnetic simulation using the finite-difference time-domain method.

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Data Analysis

16 Best Free and Open Source Python Data Analysis

June 17, 2026 Steve Emms Roundup, Scientific

Here’s our verdict of the finest free and open source Python-based data analysis tools captured in a legendary LinuxLinks-style ratings chart.

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Natural Language Processing

20 Useful R Natural Language Processing Tools

June 17, 2026 Steve Emms Programming, Roundup, Scientific

Natural language processing (NLP) is a set of techniques for using computers to detect in human language the kinds of things that humans detect automatically.

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Physics

WarpX – advanced electromagnetic and electrostatic Particle-In-Cell code

June 17, 2026 Steve Emms Scientific

WarpX is an advanced electromagnetic and electrostatic Particle-In-Cell code.

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Bioinformatics

16 Best Free and Open Source Linux Biology Tools

June 17, 2026 Steve Emms Roundup, Scientific

Biologists will be eager to use this biology software for research. We pick the finest free and open source biology tools for Linux.

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Maths

SfePy – finite element software package

June 17, 2026 Steve Emms Scientific

SfePy is a finite element software package written primarily in Python for solving systems of coupled partial differential equations.

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Data Analysis

pyjanitor – extend pandas with readable data-cleaning functions

June 17, 2026 Steve Emms Scientific

pyjanitor is a Python library that extends pandas with a collection of convenient, readable data-cleaning functions.

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dna-medical

8 Best Free and Open Source Linux Electronic Medical Records Software

June 16, 2026 Steve Emms Roundup, Scientific

This article focuses on software that provides Electronic Medical Records (EMR) functionality.

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Data Science

15 Best Free and Open Source Python Data Validation

June 16, 2026 Steve Emms Roundup, Scientific

Our recommended tools for performing data validation using Python.

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Data Analysis

xarray – work with labelled multi-dimensional arrays and datasets

June 16, 2026 Steve Emms Scientific

xarray is a Python package for working with labelled multi-dimensional arrays and datasets.

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Maths

PyMC – Bayesian statistical modeling and probabilistic programming

June 16, 2026 Steve Emms Scientific

PyMC is a Python package for Bayesian statistical modeling and probabilistic programming.

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Natural Language Processing

TALL (Text Analysis for ALL) is an R Shiny application

June 16, 2026 Steve Emms Scientific

TALL (Text Analysis for ALL) is an R Shiny application for exploring, modelling, and visualizing textual data.

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Basilisk – numerical simulation framework

June 16, 2026 Steve Emms Scientific

Basilisk is a numerical simulation framework for solving partial differential equations on adaptive Cartesian meshes.

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Development

8 Top Free and Open Source Graphical User Interfaces for R

June 16, 2026 Steve Emms Roundup, Scientific

To provide an insight into the quality of software available for Linux, we give our verdict on the best graphical user interfaces for R.

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Data

11 Best Free and Open Source Linux Data Mining Software

June 15, 2026 Steve Emms Office, Roundup, Scientific

Data mining (also known as knowledge discovery) is the process of gathering large amounts of valid information, analyzing that information and condensing it into meaningful data.

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Maths

Pyomo – object-oriented algebraic modeling language

June 15, 2026 Steve Emms Scientific

Pyomo is an object-oriented algebraic modeling language designed for formulating, analyzing, and solving structured optimization problems.

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Maths

JAX – Python library for high-performance numerical computing

June 15, 2026 Steve Emms Scientific

JAX is a Python library for high-performance numerical computing and large-scale machine learning.

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