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Search Results for: essential system tools

Data Visualization

Pygal – Dynamic SVG Charting Library

November 3, 2023 Eilidih Parris Scientific

PYthon svg GrAph plotting Library (pygal) is a dynamic SVG charting library written in Python.

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Data Visualization

bqplot – Interactive Plotting Framework for the Jupyter Notebook

November 3, 2023 Eilidih Parris Scientific

bqplot is a Grammar of Graphics-based interactive plotting framework for the Jupyter notebook.

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Data Visualization

plotnine – Implementation of a Grammar of Graphics in Python

November 3, 2023 Eilidih Parris Scientific

plotnine is an implementation of a grammar of graphics in Python. It’s based on ggplot2. The grammar allows users to compose plots by explicitly mapping data to the visual objects that make up the plot.

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Data Visualization

Plotly Python Library – Interactive, Browser-based Graphing Library for Python

November 3, 2023 Eilidih Parris Scientific

Plotly’s Python browser-based graphing library makes interactive, publication-quality graphs online.

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Data Visualization

Vega-Altair – Declarative Statistical Visualization in Python

November 3, 2023 Eilidih Parris Scientific

Vega-Altair is a declarative statistical visualization library for Python, based on Vega and Vega-Lite. This means you can write Python but output Vega-Lite.

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Data Visualization

VisPy – Interactive Scientific Visualization in Python

November 3, 2023 Eilidih Parris Scientific

VisPy is a high-performance, interactive, 2D/3D data visualization open source Python library.

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Data Visualization

seaborn – Statistical Data Visualization with this Python library

November 3, 2023 Eilidih Parris Scientific

Seaborn is a Python visualization library. It provides a high-level interface for drawing attractive statistical graphics in an easy way without too much boilerplate code.

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Data Visualization

Bokeh – Python Interactive Visualization Library

November 3, 2023 Eilidih Parris Scientific

Bokeh is an interactive visualization library that targets modern web browsers for presentation.

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Bioinformatics

SeqViz – protein sequence viewer

November 3, 2023 Steve Emms Scientific

SeqViz is a DNA, RNA, and protein sequence viewer written in the TypeScript programming language.

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Bioinformatics

VMD – molecular visualization program

November 3, 2023 Steve Emms Scientific

VMD is a molecular visualization program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scripting.

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Bioinformatics

simuPOP – general-purpose individual-based forward-time population genetics simulation environment

November 3, 2023 Steve Emms Scientific

simuPOP is a general-purpose individual-based forward-time population genetics simulation environment.

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Bioinformatics

MUSCLE – multiple alignment software

November 3, 2023 Steve Emms Scientific

MUSCLE is a program for creating multiple alignments of amino acid or nucleotide sequences.

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Bioinformatics

SeaView – graphical user interface for molecular phyologeny

November 3, 2023 Steve Emms Scientific

SeaView is a multi-platform, graphical user interface for multiple sequence alignment and molecular phylogeny.

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Bioinformatics

TREE-PUZZLE – maximum likelihood analysis for nucleotide, amino acid, and two-state data

November 3, 2023 Steve Emms Scientific

TREE-PUZZLE (previously known as PUZZLE) is an interactive console program that implements a fast tree search algorithm, quartet puzzling.

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Bioinformatics

TreeView X – phylogeny tree viewer

November 3, 2023 Steve Emms Scientific

TreeView X is an open source and multi-platform program to display phylogenetic trees. It can read and display NEXUS and Newick format tree files.

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Underrun – twin stick shooter game

November 3, 2023 Steve Emms Games

Underrun is a twin stick shooter using WebGL. The game is written in JavaScript.

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Taisei – shoot’em up game in the style of the Touhou Project

November 3, 2023 Steve Emms Games

Taisei is a top down perspective shoot’em up game in the style of the Touhou Project. It’s fast, furious, and good fun to play.

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Project: Starfighter – free side-scrolling shoot ’em up space game

November 3, 2023 Steve Emms Games

Project: Starfighter is a 2D mission-based shoot-’em-up game. The player takes control of Chris Bainfield, a rebel pilot from a star system known as Spirit.

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Powermanga – arcade 2D shoot-em-up game

November 3, 2023 Steve Emms Games

Powermanga is a shoot’em up game; you will have to fight more than 60 different types of enemies.

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n-gon – 2D physics rogue-lite platformer shooter

November 3, 2023 Steve Emms Games

n-gon is a 2D physics rogue-lite platformer shooter.

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