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Category: Scientific

Data Science

JupyterLab – Data Science Notebook

October 19, 2023 Eilidih Parris Scientific

JupyterLab is an extensible environment for interactive and reproducible computing.

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DNA

Apollo – genome annotation editor

October 18, 2023 Steve Emms Scientific

Apollo is a collaborative, real-time, genome annotation editor. The stack is a Java web application / database backend.

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DNA

Artemis – genome viewer and annotation tool

October 18, 2023 Steve Emms Scientific

Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses.

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DNA

JBrowse – fast, scalable genome browser

October 18, 2023 Steve Emms Scientific

JBrowse is a fast, scalable genome browser built completely with JavaScript and HTML5. It can run on your desktop, or embedded in a website.

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DNA

Integrated Genome Browser – visualization for genome-scale data

October 18, 2023 Steve Emms Scientific

Integrated Genome Browser (IGB) is a fast, free, and highly customizable genome browser you can use to view and explore big genomic datasets.

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DNA

Genome Workbench – rich set of integrated tools for studying and analyzing genetic data

October 18, 2023 Steve Emms Scientific

NCBI Genome Workbench is an integrated application for viewing and analyzing sequences.

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DNA

Tablet – graphical viewer for next generation sequence assemblies and alignments

October 18, 2023 Steve Emms Scientific

Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments.

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CDROM

fre:ac – audio converter and CD ripper

October 17, 2023 Steve Emms Scientific

fre:ac is an audio converter and CD ripper that supports a wide range of popular formats and encoders.

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CDROM

Asunder – graphical audio CD ripper and encoder

October 17, 2023 Steve Emms Scientific

Asunder is a graphical Audio CD ripper and encoder for Linux. It supports a wide variety of formats.

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Bioinformatics

Bioconductor – tools for the analysis and comprehension of high-throughput genomic data

October 17, 2023 Steve Emms Scientific

Bioconductor is a software project which provides tools for the analysis and comprehension of high-throughput genomic data.

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