SeqKit is a fast, cross-platform command-line toolkit for manipulating FASTA and FASTQ files.
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Category: CLI
MultiQC – aggregate results from bioinformatics analyses
MultiQC is a reporting tool that aggregates results from multiple bioinformatics analyses and samples into a single report
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14 Best Free and Open Source Command-Line Python Application Development Tools
Python comes with several different libraries that allow you to write a command line interface for your scripts.
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13 Best Free and Open Source Snippet Tools
A snippet tool is utility software that can boost your productivity. They are especially useful to save complex commands
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TeXtidote – command-line correction tool
TeXtidote is a command-line correction tool designed for LaTeX documents.
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OpenQuake Engine – seismic hazard and risk analysis
OpenQuake Engine is software for seismic hazard and risk analysis developed by the Global Earthquake Model Foundation.
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28 Best Free and Open Source Terminal-Based Linux Calculators
One of the basic utilities supplied with any operating system is the calculator. We recommend the finest terminal-based calculators.
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Cyclopts – Python framework for building command-line interfaces
Cyclopts is a Python framework for building command-line interfaces from type hints.
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qalc – command-line interface for Qalculate!
qalc is the CLI for Qalculate!, a powerful multipurpose calculator designed for both everyday arithmetic and advanced mathematical work.
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SnipKit – command-line snippet manager
SnipKit is a command-line snippet manager that lets you search for and execute scripts without leaving the terminal.
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sbctl – create, enroll and manage Secure Boot keys
sbctl is a command-line utility for creating, enrolling and managing Secure Boot keys.
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Soar – distro-independent package manager
Soar is a distro-independent package manager for portable Linux applications.
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8 Best Free and Open Source Cheatsheet Tools
A cheatsheet is a concise set of notes used for quick reference. We recommend the best cheatsheet tools for Linux.
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Ronin – Ruby toolkit for security research and development
Ronin is a Ruby toolkit for security research and development. It provides command-line tools and libraries
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12 Best Free and Open Source Linux Terminal-Based Port Scanners
Linux has a good range of port scanners that help administrators identify and rectify weaknesses in a system.
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22 Best Free and Open Source Terminal-Based Batch Renamers
This article showcases terminal based batch renamers. We only feature free and open source software.
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33 Best Free and Open Source Linux GUI Application Launchers
Application launchers play an integral part in making the Linux desktop a more productive environment to work and play.
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XMap – fast network scanner
XMap is a fast network scanner for large-scale IPv4 and IPv6 research.
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edmv – bulk rename files
edmv is a command-line utility that lets you bulk rename files using your preferred text editor.
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pipe-rename – command-line batch renamer
pipe-rename is a command-line batch renamer that lets you edit filenames using your preferred text editor.
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