trackplot is a tool for visualizing DNA-seq, RNA-seq, single-cell RNA-seq and full-length sequencing datasets.
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Tag: genome
HiGlass – tool for exploring and compare genomic contact matrices and tracks
HiGlass is a web-based viewer for datasets too large to view at once.
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9 Best Free and Open Source Linux Desktop Genome Browsers
There are numerous tools to browse genomes. While there’s considerable overlap in functionality, each software offers unique features or data.
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23 Best Free and Open Source Linux Bioinformatics Tools
This article identifies our favourite tools which are extremely useful for anyone interested in sequence analysis, molecular modelling, molecular dynamics, phylogenetic analysis and more.
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Apollo – genome annotation editor
Apollo is a collaborative, real-time, genome annotation editor. The stack is a Java web application / database backend.
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Artemis – genome viewer and annotation tool
Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses.
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JBrowse – fast, scalable genome browser
JBrowse is a fast, scalable genome browser built completely with JavaScript and HTML5. It can run on your desktop, or embedded in a website.
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Integrated Genome Browser – visualization for genome-scale data
Integrated Genome Browser (IGB) is a fast, free, and highly customizable genome browser you can use to view and explore big genomic datasets.
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Genome Workbench – rich set of integrated tools for studying and analyzing genetic data
NCBI Genome Workbench is an integrated application for viewing and analyzing sequences.
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Tablet – graphical viewer for next generation sequence assemblies and alignments
Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments.
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