Scientific Archives - Page 34 of 59

Biopython – tools for biological computation written in Python

Biopython is a set of freely available tools for biological computation written in Python by an international team of developers.

BioPerl is a collection of Perl tools for computational molecular biology used by large and small academic laboratories, and pharmaceuticals.

The Integrative Genomics Viewer is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets.

InterMine is a data warehouse system for the integration and analysis of biological data.

UGENE is a cross-platform set of integrated bioinformatics software integrating well-known biological tools and algorithms.

BioJava is a project dedicated to providing Java tools for processing biological data.

The bedtools utilities are a swiss-army knife of tools for a wide-range of genomics analysis tasks.

EMBOSS is The European Molecular Biology Open Software Suite developed for the needs of the molecular biology (e.g. EMBnet) user community.

Clustal Omega is a multiple sequence alignment program for protein and DNA/RNA using seeded guide trees and HMM profile-profile techniques.

The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences.