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Search Results for: essential system tools

Recording Studio

Kazam – screencasting program created with design in mind

October 17, 2023 Steve Emms Multimedia

Kazam is an essential tool which provides a well designed and easy to use interface for capturing screencasts and screenshots.

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DNA

Ensembl Genome Browser – retrieve genomic information

October 17, 2023 Steve Emms Web Apps

Ensembl is a centralized resource for geneticists, molecular biologists and other researchers studying genomes.

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DNA

UCSC Genome Browser – interactively visualize genomic data

October 17, 2023 Steve Emms Web Apps

The UCSC Genome Browser is an on-line, and downloadable, genome browser.

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DNA

Genome Data Viewer – genome browser for exploration and analysis of eukaryotic RefSeq genome assemblies

October 17, 2023 Steve Emms Web Apps

NCBI Genome Data Viewer is a genome browser supporting the exploration and analysis of more than 730 eukaryotic RefSeq genome assemblies.

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CDROM

fre:ac – audio converter and CD ripper

October 17, 2023 Steve Emms Scientific

fre:ac is an audio converter and CD ripper that supports a wide range of popular formats and encoders.

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CDROM

Asunder – graphical audio CD ripper and encoder

October 17, 2023 Steve Emms Scientific

Asunder is a graphical Audio CD ripper and encoder for Linux. It supports a wide variety of formats.

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CDROM

grip – cd-player and cd-ripper for the Gnome desktop

October 17, 2023 Steve Emms Multimedia

grip is a cd-player and cd-ripper for GNOME. It has the ripping capabilities of cdparanoia builtin, but can also use external rippers.

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CDROM

ripperX – rip CD audio tracks

October 17, 2023 Steve Emms Multimedia

ripperX is an open source graphical interface for ripping CD audio tracks and encoding them to Ogg, MP2, MP3, or FLAC formats.

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CDROM

Sound Juicer – audio CD extractor

October 17, 2023 Steve Emms Multimedia

Sound Juicer is a lean CD ripper using GTK+ and GStreamer. It extracts audio from CDs and converts it into audio files.

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CDROM

Audex – tool for ripping compact discs

October 17, 2023 Steve Emms Multimedia

Audex is an easy to use audio CD ripping application. Audex works together with command line encoders in general.

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Bioinformatics

Integrative Genomics Viewer – high-performance visualization tool for interactive exploration of large, integrated genomic datasets

October 17, 2023 Steve Emms Scientific

The Integrative Genomics Viewer is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets.

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Bioinformatics

InterMine – integrate biological data sources

October 17, 2023 Steve Emms Scientific

InterMine is a data warehouse system for the integration and analysis of biological data.

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Bioinformatics

UGENE – bioinformatics software

October 17, 2023 Steve Emms Scientific

UGENE is a cross-platform set of integrated bioinformatics software integrating well-known biological tools and algorithms.

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Bioinformatics

BioJava – Java framework for bioinformatics

October 17, 2023 Steve Emms Scientific

BioJava is a project dedicated to providing Java tools for processing biological data.

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Bioinformatics

EMBOSS – software analysis package for molecular biology

October 17, 2023 Steve Emms Scientific

EMBOSS is The European Molecular Biology Open Software Suite developed for the needs of the molecular biology (e.g. EMBnet) user community.

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Bioinformatics

Clustal Omega – multiple sequence alignment program

October 17, 2023 Steve Emms Scientific

Clustal Omega is a multiple sequence alignment program for protein and DNA/RNA using seeded guide trees and HMM profile-profile techniques.

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Bioinformatics

Basic Local Alignment Search Tool – find regions of similarity between biological sequences

October 17, 2023 Steve Emms Scientific

The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences.

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Bioinformatics

geWorkbench – software platform for integrated genomic data analysis

October 17, 2023 Steve Emms Scientific

geWorkbench (genomics Workbench) is a Java-based open-source platform for integrated genomics.

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Bioinformatics

Bioclipse – workbench for the life sciences

October 17, 2023 Steve Emms Scientific

The Bioclipse project is a visual platform for chemo- and bioinformatics based on the Eclipse Rich Client Platform (RCP).

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Library Tools

VuFind – search and browse through library resources

October 17, 2023 Steve Emms Education

VuFind is a library resource portal designed and developed for libraries by libraries.

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