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Tag: java

Document Management Systems

Open LaTeX Studio – LaTeX editor supporting remote collaboration between users

October 18, 2023 Steve Emms Documents

Open LaTeX Studio is an initiative to create a LaTeX editor that supports remote collaboration between users.

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Music Education

Tete – ear training software

October 18, 2023 Steve Emms Education, Multimedia

Tete is an ear trainer. Ear training involves learning to recognise how different combinations of notes sound.

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ebook reader

EpubCheck – Validate your EPUB Books

October 18, 2023 Steve Emms Documents

EpubCheck is a tool to validate EPUB files. It can detect many types of errors in EPUB.

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Subtitles

Jubler – edit text-based subtitles

October 18, 2023 Steve Emms GUI, Multimedia

Jubler is a tool to edit text-based subtitles, useful as an authoring software for new subtitles or to modify existing subtitles.

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VoIP

Jitsi – innovative open source voice and video conferencing

October 18, 2023 Steve Emms Internet

Jitsi is a set of open-source projects that allows you to easily build and deploy secure videoconferencing solutions.

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DNA

Apollo – genome annotation editor

October 18, 2023 Steve Emms Scientific

Apollo is a collaborative, real-time, genome annotation editor. The stack is a Java web application / database backend.

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DNA

Artemis – genome viewer and annotation tool

October 18, 2023 Steve Emms Scientific

Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses.

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DNA

Integrated Genome Browser – visualization for genome-scale data

October 18, 2023 Steve Emms Scientific

Integrated Genome Browser (IGB) is a fast, free, and highly customizable genome browser you can use to view and explore big genomic datasets.

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DNA

Tablet – graphical viewer for next generation sequence assemblies and alignments

October 18, 2023 Steve Emms Scientific

Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments.

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Recording Studio

ScreenStudio – streaming made easy

October 18, 2023 Steve Emms Multimedia

ScreenStudio will let you record your desktop in a full HD video files. Overlay some text or even your webcam.

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Mind Mapping

Freeplane – free mind mapping software

October 18, 2023 Steve Emms Productivity

Freeplane is software that supports thinking, sharing information and getting things done at work, in school and at home.

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Mind Mapping

FreeMind – Java based mind mapping software

October 18, 2023 Steve Emms Productivity

FreeMind is a free mind mapping application written in Java. It therefore runs on a wide variety of operating systems, including Linux.

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Bioinformatics

Integrative Genomics Viewer – high-performance visualization tool for interactive exploration of large, integrated genomic datasets

October 17, 2023 Steve Emms Scientific

The Integrative Genomics Viewer is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets.

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Bioinformatics

InterMine – integrate biological data sources

October 17, 2023 Steve Emms Scientific

InterMine is a data warehouse system for the integration and analysis of biological data.

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Bioinformatics

BioJava – Java framework for bioinformatics

October 17, 2023 Steve Emms Scientific

BioJava is a project dedicated to providing Java tools for processing biological data.

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Bioinformatics

Taverna Workbench – tools for designing and executing workflow

October 17, 2023 Steve Emms Scientific

The Taverna workbench is an open source software tool for designing and executing bioinformatics workflows created by the myGrid project.

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Bioinformatics

geWorkbench – software platform for integrated genomic data analysis

October 17, 2023 Steve Emms Scientific

geWorkbench (genomics Workbench) is a Java-based open-source platform for integrated genomics.

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Bioinformatics

Bioclipse – workbench for the life sciences

October 17, 2023 Steve Emms Scientific

The Bioclipse project is a visual platform for chemo- and bioinformatics based on the Eclipse Rich Client Platform (RCP).

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Library Tools

Greenstone – build and distribute digital library collections

October 17, 2023 Steve Emms Education

Greenstone is a comprehensive digital library creation, management, and distribution package.

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Project Management

ProjectLibre – standalone replacement for Microsoft Project

October 17, 2023 Steve Emms Documents

ProjectLibre was founded to provide an open source replacement of Microsoft Project desktop. It offers a similar user interface.

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Programming Books

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