Last Updated on August 22, 2023
The GenomeBrowse visualization tool delivers stunning visualizations of your genomic data that give you the power to see what is occurring at each base pair in your samples.
A high performance backend is paired with an intuitive user interface to make sure that your discovery process is fluid and streamlined.
GenomeBrowse is free for academic use only.
Features include:
- Display all your alignment data. Looking at all your samples in one view can help you spot contextually relevant findings.
- Generate publication quality plots that showcase how your data clearly supports your discoveries. Plots are rendered to ensure that your data looks as good in print as it did on screen. All user interface elements that might distract from your data are stripped from the image. Colors are highly customizable, and a cross-plot anchor can be set to draw attention to the most relevant discoveries.
- Displays the raw data the variant caller used to make its decision.
- Control programmatically via HTTP so that you can quickly generate the visualizations that interest you via remote access. Use the built-in automation functionality to integrate GenomeBrowse into your existing workflow with ease and flexibility.
- Focuses on displaying data in a form that helps you quickly and easily understand what the data is saying.
- Expression Editor can be used in GenomeBrowse to filter data in plot views or within the Annotation Convert Source Wizard to create additional fields to be included in custom annotation sources.
- Supported file formats: BAM, VCF, FTF, FASTA, TSV & CSV, BED 2Bit, WIG, and custom data sources.
- Plots can be exported to several image formats including SGV.
- Import IGV Session – allows data sources from Integrative Genomics Viewer (IGV) session files to be imported. These files are stored as XML (.xml).
Website: goldenhelix.com/products/GenomeBrowse
Support:
Developer: Golden Helix, Inc.
License: Proprietary
Return to Desktop Genome Browsers
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