InterMine is a data warehouse system for the integration and analysis of biological data.
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Search Results for: free programming tutorials
UGENE – bioinformatics software
UGENE is a cross-platform set of integrated bioinformatics software integrating well-known biological tools and algorithms.
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BioJava – Java framework for bioinformatics
BioJava is a project dedicated to providing Java tools for processing biological data.
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bedtools – powerful toolset for genome arithmetic
The bedtools utilities are a swiss-army knife of tools for a wide-range of genomics analysis tasks.
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EMBOSS – software analysis package for molecular biology
EMBOSS is The European Molecular Biology Open Software Suite developed for the needs of the molecular biology (e.g. EMBnet) user community.
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Clustal Omega – multiple sequence alignment program
Clustal Omega is a multiple sequence alignment program for protein and DNA/RNA using seeded guide trees and HMM profile-profile techniques.
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Basic Local Alignment Search Tool – find regions of similarity between biological sequences
The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences.
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Taverna Workbench – tools for designing and executing workflow
The Taverna workbench is an open source software tool for designing and executing bioinformatics workflows created by the myGrid project.
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geWorkbench – software platform for integrated genomic data analysis
geWorkbench (genomics Workbench) is a Java-based open-source platform for integrated genomics.
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Bioclipse – workbench for the life sciences
The Bioclipse project is a visual platform for chemo- and bioinformatics based on the Eclipse Rich Client Platform (RCP).
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VuFind – search and browse through library resources
VuFind is a library resource portal designed and developed for libraries by libraries.
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Koha – scalable library management system
Koha is a highly popular, award-winning open source integrated library system. Koha offers cataloging, searching, and an acquisitions system.
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Evergreen – library software
Evergreen is an Integrated Library System (ILS) originally developed by the Georgia Public Library Service.
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PMB – library automation system
PMB is a French library automation system based on PHP and MySQL. It is a highly customizable productivity tool.
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Greenstone – build and distribute digital library collections
Greenstone is a comprehensive digital library creation, management, and distribution package.
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OpenBiblio – automated library system
OpenBiblio is an easy to use, integrated, automated library management system. This application contains Open Public Access Catalogue.
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Leantime – project management for the non-project manager
Leantime is a strategic project management system for non-project managers.
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Focalboard – self-hosted project management tool
Focalboard is a self-hosted project management tool that helps define, organize, track and manage work across individuals and teams.
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OpenProject – Collaborative Project Management
OpenProject is a web-based open source project management system for location-independent team collaboration.
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tuleap – Software development & agile management
Tuleap is a suite designed to improve management of software development and collaboration.
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