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Top : Software : Scientific : Biology : Analysis

Highlights
Backup with these DeDuplicating Encryption Tools
This article provides a quick roundup of 6 deduplicating encryption backup tools.

(Read more)
SquirrelMail
SquirrelMail is a standards-based webmail package written in PHP4. It includes built-in pure PHP support for the IMAP and SMTP protocols, and all pages render in pure HTML 4.0 (with no JavaScript required) for maximum compatibility across browsers. It has very few requirements and is very easy to configure and install. SquirrelMail has all the functionality you would want from an email client, including strong MIME support, address books, and folder manipulation. Read more

Links:

  • ARB
    ARB is a graphically oriented package comprising various tools for sequence database handling and data analysis.
  • BioConductor
    BioConductor produces an open source software framework that will assist biologists and statisticians working in bioinformatics, with primary emphasis on inference using DNA microarrays. The team is based at the Biostatistics Unit of the Dana Farber Cancer Institute at Harvard Medical School/Harvard School of Public Health. Participation of interested developers/investigators at other institutions is encouraged. Read more
  • BioWish
    BioWish is a molecular biology command extension to Tcl/Tk. Features include: sequence statistics, G+C content in different positions, database searches with BLAST, and more.
  • CNS
    Crystallography & NMR System: for macromolecular structure analysis.
  • Fqutils
    Fqutils provides a basic set of bioinformatics commandline tools for working with sequence data in FASTQ format.
  • Intrinsic Noise Analyzer
    iNA is a computational tool for quantitative analysis of fluctuations in biochemical reaction networks. Such fluctuations, also known as intrinsic noise, arise due to the stochastic nature of chemical reactions and cannot be ignored when some molecules are present in very low copy numbers only, as is the case in living cells
  • LabKey Server
    LabKey Server is open source software that helps scientists manage, analyze, and share complex datasets. It supports tandem mass spectrometry, flow cytometry, assays for neutralizing antibodies,
  • NAMD
    NAMD is a parallel, object-oriented molecular dynamics code designed for high-performance simulation of large biomolecular systems. Read more
  • SeqPup
    SeqPup is a biological sequence editor and analysis program. It includes links to network services and external analysis programs.
  • UGENE
    UGENE is free open-source cross-platform set of integrated bioinformatics software. Read more



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