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AmplifX The main purpose of AmplifX is to seek in a collection of primers, such as any molecular biologist get in his refrigerators, those which can be use to amplify a fragment into a target sequence, for example, and particularly, to design strategies to screen recombinant clones by PCR. CellProfiler CellProfiler cell image analysis software is designed for biologists without training in computer vision or programming to quantitatively measure phenotypes from thousands of images automatically. CF Score CF Score assists in the scoring and monitoring of chest radiographs of patients with cystic fibrosis, using the Brasfield method. CLC Free Workbench CLC Free Workbench creates a software environment enabling users to make a large number of bioinformatics analyses, combined with smooth data management, and excellent graphical viewing and output options. CLC Sequence Viewer CLC Sequence Viewer creates a software environment enabling users to make a large number of bioinformatics analyses, combined with smooth data management, and excellent graphical viewing and output options. Creatures Creatures is a program for the exploration of evolution, natural selection, genetic programming, and artificial life. DNA Molar Converter The DNA Molar Converter widget allows to perform molar conversions for nucleic acids according to size. DNA/Protein Converter The DNA/Protein Converter widget allows to perform size conversions between DNA and protein. EnzymeX a program for molecular biologists, developed to help you determine which restriction enzymes you should use to cut your DNA of interest. In addition, it gives you all the specific properties of these enzymes so that you can make sure that every single digestion is a success FoldingObserver FoldingObserver gives you a simple possibility to monitor your Folding@Home clients within your local network. It works with the command line client, the screensaver and the standalone version of Folding@Home. You can keep track of lots of details of your clients. LSystem LSystem is a free Mac OS X application for exploring Lindenmayer systems Molegro Virtual Docker (commercial) Molegro Virtual Docker is an integrated platform for predicting protein - ligand interactions. Molegro Virtual Docker handles all aspects of the docking process from preparation of the molecules to determination of the potential binding sites of the target protein, and prediction of the binding modes of the ligands. Nucleic Acid MW The Nucleic Acid MW widget allows to calculate the molecular weight of a nucleic acid sequence. Picomole Ends The Picomole Ends widget allows to calculate the number of picomole ends per microgram of double stranded linear DNA. Protein Molar Converter The Protein Molar Converter widget allows to perform molar conversions for proteins according to size. ProteinGlimpse ProteinGlimpse is a free widget for visualizing macromolecules retrieved from the RCSB Protein Data Bank. RAAViewer RAAViewer allows viewing of labeled images of human anatomy. The labels are linked to a database that offers in-depth descriptions of the parts of anatomy. Serial Cloner Serial Cloner provides tools with an intuitive interface that assists you in DNA cloning, sequence analysis and visualisation. It reads and write DNA Strider-compatible files and import and export files in the universal FASTA format (as well as in pDRAW32 format). Powerful graphical display tools and simple interfaces help the analysis and construction steps in a very intuitive way. SMaRTFinder SMaRTFinder is a command line tool to search biosequences for structured motifs (or structured models), that is lists of patterns separated by distance intervals. SpectroConverter The Spectro Converter widget converts A260 to concentration (in µg/ml) for dsDNA, ssDNA and ssRNA. Swiss-PdbViewer Swiss-PdbViewer is an application that provides a user friendly interface allowing to analyze several proteins at the same time. The proteins can be superimposed in order to deduce structural alignments and compare their active sites or any other relevant parts. Amino acid mutations, H-bonds, angles and distances between atoms are easy to obtain thanks to the intuitive graphic and menu interface. Transform Transform provides common text & DNA/protein sequence transformations. XplasMap XPlasMap draws plasmid maps, showing features such as genes, promoters, multiple cloning sites, and restriction enzymes. The maps are designed to be easily modified (e.g. to map new inserts in a vector), and features can be customized in a number of ways.
