3D-XplorMath-J is a program for visualizing and experimenting with a variety of mathematical objects or "exhibits."
Autoplot is an interactive browser for data on the Web. Give Autoplot a URL or a local file name and it creates a sensible plot of the data.
Cassandra is an open source data viewer based on VTK. Cassandra provides dynamic interaction with the VTK pipeline and enables to load plugins dynamically in order to perform specific tasks in data manipulation and visualisation.
CharGer is a conceptual graph editor intended to support research projects and education. Its current version is primarily an editor to create visual display of graphs. It is deliberately and explicitly a research tool meant for conceptual graph researchers to explore implementation issues in conceptual graph interfaces.
Cuttlefish aims to be a highly extensible visualization and analysis platform for all kinds of network data.
Databionic ESOM Tools
Databionic ESOM Tools is a suite of programs to perform data mining tasks like clustering, visualization, and classification with Emergent Self-Organizing Maps
a Java component for displaying and manipulating nodal data. It gives the user the ability to visualize large graph or tree structures by means of expanding and collapsing portions of the structure and by easily zooming in and out
Integrated Data Viewer
The Integrated Data Viewer (IDV) from Unidata is a framework for analyzing and displaying geoscience data. Developed using Java, VisAD and other component libraries, the IDV emphasizes interactive 3-Dimensional visualization and integration of diverse data types.
JFunctionViewer is a simple and fast function plotter. It can be run as an applet in any Java 5.0-capable browser. It can also be downloaded and used offline.
JGR (pronounced 'Jaguar') is a universal and unified graphical user interface for R. Read more
jHepWork is a full-featured object-oriented data analysis framework for scientists. Jython macros are used to plot data, 1D and 2D histograms, perform fit, etc. The program includes many tools for interactive scientific plots in 2D and 3D. Data structures and data manipulation methods integrated with Java and JAIDA classes combines remarkable power with a very clear syntax. Read more
takes volumetric data (particularly electron density data) and polygonises them, in order to produce up to five iso-surfaces. The result is written to a VRML97 (VRML2.0) file, which can then be viewed with any VRML viewer of your choice or with the included Java3D VRML viewer
Mondrian Data Visualizer
Mondrian is a general purpose statistical data visualization system. All plots in Mondrian are fully linked and offer various interactions and queries. Any case selected in a plot is highlighted in all other plots. Currently implemented plots include mosaic plot, scatter plots and SPLOM, maps, bar charts, histograms, missing value plots, parallel coordinates/boxplots, and y by x boxplots.
Openchart2 is a simple charting and plotting library designed for incorporation with a variety of Java applications. The library can generate two dimensional bar, pie, radar, and scatter charts with customized titles, axis labels, legends, and colors. The simplicity of the library is its strongest feature. Openchart2 is a branch of the original JOpenChart library.
PLOTlet is a tool to quickly create plots and charts. It lets you quickly create charts and chart grids, process plots automatically in batch, align multiple graphs easily, and export them in high quality.
Powderplot is a tiny utility to visualize Rietan-2000's output files. There is also an applet whitch enables to embed powder patterns in HTML documents.
TerraViewer is a program that downloads and displays USGS photos and maps. It is very easy to use.
TrafficObjects periodically fetches data from remote databases and files and enables users to graphically create realtime streaming charts for monitoring and data mining. Plot data is fetched from databases such as Oracle, PostgreSQL, SQL Server, etc., and data is fetched from text files such as CSV, Tabular, and PostgreSQL Log files.
Visual Paradigm for UML Community Edition
Visual Paradigm for the Unified Modeling Language (VP-UML) is a UML CASE tool. The tool is designed for a wide range of users, including Software Engineers, System Analysts, Business Analysts, System Architects alike, who are interested in building large scale software systems reliably through the use of the Object-Oriented approach. VP-UML supports the latest standards of Java and UML notations and provides the industry's full round-trip code generation and code reverse engineering support for Java.
Visualization of Protein-Ligand Graphs
The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm.
Walrus is a tool for interactively visualizing large directed graphs in three-dimensional space. By employing a fisheye-like distortion, it provides a display that simultaneously shows local detail and the global context.
WilmaScope is a Java3D application which creates real time 3d animations of dynamic graph structures. Currently supported features include: Basic graph components, text labels, translucent clusters of nodes, and more.